References Schultz et al. (1998) Proc. Natl. Acad. Sci. USA 95, 5857-5864 Schultz et al. (2000) Nucleic Acids Res 28, 231-234 HOME | LITERATURE | ABOUT | GLOSSARY | WHAT'S NEW | FEEDBACK

S imple M odular A rchitecture R esearch T ool

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Transmembrane segments as predicted by the TMHMM2 program (), coiled coil regions determined by the Coils2 program () and Segments of low compositional complexity, determined by the SEG program ()signal peptides determined by the SignalP program (), GPI anchors are indicated by (). Hits only found by BLAST are indicated by  for hits in the schnipsel database and  for hits against PDB. Regions containing repeats detected by Prospero, but not covered by domains are indicated by 
 
 

Architecture analysis

The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Low complexity. In either case, features not shown in the above diagram are marked 'hidden'

Summary of BLAST results. Note that the probabilities are not directly comparable to those in the table above.